BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026D07SP1|AL428542
(624 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1530 997 0.0
3x_Contig76 195 7e-50
>3x_Contig1530
Length = 6216
Score = 997 bits (495), Expect = 0.0
Identities = 588/625 (94%), Gaps = 3/625 (0%)
Strand = Plus / Plus
Query: 2 atctcttggttctcgcatcgatgaagaacgcagcgaattgcgatatgtattgtgaattgc 61
||||||| |||||||||| || || ||| || | |||||| |||| |||| | |||| |
Sbjct: 1682 atctcttttttctcgcatctataaataacccacctaattgctatatttatttttaatttc 1741
Query: 62 agattttcgtgaatcatcaaatctttgaacgcacattgcgccctctggtattccaggggg 121
| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 atattttcttaaatcatcaaatctttgaacgcacattgcgccctctggtattccaggggg 1801
Query: 122 -catgcctgtttgagcgtcatttctctctcaaacctttgggtttggtagtgagtgatact 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 gcatgcctgtttgagcgtcatttctctctcaaacctttgggtttggtagtgagtgatact 1861
Query: 181 cgtttttcgggttaacttgaaagtggctagccgttgccttctgcgtgas-rgagctgcgt 239
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 1862 cgtttttcgggttaacttgaaagtggctagccgttgccttctgcgtgagcagggctgcgt 1921
Query: 240 gtcaagtctatggactcgactcttgcacatctacgtcttaggtttgcgccaattcgtggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 gtcaagtctatggactcgactcttgcacatctacgtcttaggtttgcgccaattcgtggt 1981
Query: 300 aagctagggtcaatgarcttataggtgttataaaramtcgctggtgtttgtatccttgar 359
|||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||||
Sbjct: 1982 aagctagggtcaatgagcttataggtgttataaagactcgctggtgtttgtctccttgag 2041
Query: 360 gcatacggcttaatcaaaactctcaaagtttgamctcaaatcargtaggaatacccgctg 419
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 2042 gcatacggcttaatcaaaactctcaaagtttgacctcaaatcaggtaggaatacccgctg 2101
Query: 420 aacttaagcatatcaataagcggaggraaagaaaccaaccgggattgccttagtaacggc 479
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2102 aacttaagcatatcaataagcggaggaaaagaaaccaaccgggattgccttagtaacggc 2161
Query: 480 gagtraagcggcaaaarctcaaatttaaaatctggcgtcttcgacgtccgarwtgtwatt 539
|||| ||||||||||| ||||||||| |||||| ||||||||||||||||| ||| |||
Sbjct: 2162 gagtgaagcggcaaaagctcaaatttgaaatct-gcgtcttcgacgtccgagttgtaatt 2220
Query: 540 tgaagaaggcaactttgtagctggtccttgtctatgttccttggaacargacgtcataga 599
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2221 tgaagaaggcaactttgtagctggtccttgtctatgttccttggaacaggacgtcataga 2280
Query: 600 gggtgagaatcccgtgtggcgagga 624
|||||||||||||||||||||||||
Sbjct: 2281 gggtgagaatcccgtgtggcgagga 2305
>3x_Contig76
Length = 894
Score = 195 bits (97), Expect = 7e-50
Identities = 459/589 (77%)
Strand = Plus / Plus
Query: 21 gatgaagaacgcagcgaattgcgatatgtattgtgaattgcagattttcgtgaatcatca 80
||||||||| | || |||||| |||||||||||||||||| ||||||| |||||| || |
Sbjct: 116 gatgaagaaagaagagaattgagatatgtattgtgaattgaagattttagtgaataataa 175
Query: 81 aatctttgaacgcacattgcgccctctggtattccagggggcatgcctgtttgagcgtca 140
||| |||||| | | |||| | | ||||||| |||||| ||| |||||||| || |
Sbjct: 176 aatatttgaaagaaaattgagaaatatggtattaaagggggaatgaatgtttgagagtaa 235
Query: 141 tttctctctcaaacctttgggtttggtagtgagtgatactcgtttttcgggttaacttga 200
||| | | | ||| ||||||||||||||||||||||| | |||||| ||||||| ||||
Sbjct: 236 tttatatataaaaaatttgggtttggtagtgagtgataatagtttttagggttaaattga 295
Query: 201 aagtggctagccgttgccttctgcgtgasrgagctgcgtgtcaagtctatggactcgact 260
|||||| ||| |||| || || |||| | | || |||| |||| |||||| | || |
Sbjct: 296 aagtggatagaagttgaattatgagtgaaagggatgagtgtaaagtatatggaatagaat 355
Query: 261 cttgcacatctacgtcttaggtttgcgccaattcgtggtaagctagggtcaatgarctta 320
||| | || || || ||||||||| | |||| |||||||| |||||| ||||| |||
Sbjct: 356 attgaaaatataagtattaggtttgagaaaattagtggtaagatagggtaaatgagatta 415
Query: 321 taggtgttataaaramtcgctggtgtttgtatccttgargcatacggcttaatcaaaact 380
||||||||||||| | | | |||||||||||| |||| | ||| || ||||| |||| |
Sbjct: 416 taggtgttataaagaatagatggtgtttgtataattgaggaataaggattaataaaaaat 475
Query: 381 ctcaaagtttgamctcaaatcargtaggaatacccgctgaacttaagcatatcaataagc 440
| ||||||||| | |||| | ||||||||| | |||| ||||| |||| ||||||
Sbjct: 476 ataaaagtttgaaataaaataaggtaggaataaaagatgaaattaagaatataaataaga 535
Query: 441 ggaggraaagaaaccaaccgggattgccttagtaacggcgagtraagcggcaaaarctca 500
||||| ||||||| || ||||||| ||||||| || |||| ||| || |||| | |
Sbjct: 536 ggaggaaaagaaaaaaaaagggattgaattagtaaaggagagtgaagaggaaaaagataa 595
Query: 501 aatttaaaatctggcgtcttcgacgtccgarwtgtwatttgaagaaggcaactttgtagc 560
||||| |||| ||| || || || || || ||| |||||||||||| || |||||||
Sbjct: 596 aatttgaaatatggagtattagaagtaagagttgtaatttgaagaaggaaaatttgtaga 655
Query: 561 tggtccttgtctatgttccttggaacargacgtcatagagggtgagaat 609
|||| |||| |||||| |||||| | || || |||||||||||||||
Sbjct: 656 tggtaattgtatatgttaattggaaaaggaagtaatagagggtgagaat 704
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2607
Number of Sequences: 1807
Number of extensions: 2607
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 624
length of database: 10,358,551
effective HSP length: 16
effective length of query: 608
effective length of database: 10,329,639
effective search space: 6280420512
effective search space used: 6280420512
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 49 (99.2 bits)